SOM cluster: 469

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 508
Promoter: 30%
CpG-Island: 65%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 0.00000000013
Factore-val(match)DB
SP10.00000024534JASPAR
NFKB10.0000063475JASPAR
TFAP2A0.00014339JASPAR
Klf40.0033445JASPAR
NF-kappaB0.023842JASPAR

BED file downloads

Download top of 508 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 110841000-110841150ATP2A245.68
chr12: 110841000-110841150ARPC345.68
chr1: 145516700-145516850HFE245.93
chr11: 75526880-75527030UVRAG46.04
chr8: 42196265-42196415IKBKB48.49
chr8: 42196265-42196415VDAC348.49
chr3: 46036525-46036675FYCO150.68
chr3: 46036525-46036675CCR950.68
chr12: 76952600-76952750RP11-613M5.152.33
chr6: 41754625-41754775TOMM652.36
View top connections.

Other

CodePlot