SOM cluster: 476

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 241
Promoter: 6%
CpG-Island: 0%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 34/100 | e-val: 1.3e-18
Factore-val(match)DB
SPIB0.000000058333JASPAR
SPI10.0000054771JASPAR
FEV0.00072806JASPAR
Stat30.0014299JASPAR
ELF50.0026306JASPAR
Sites: 23/100 | e-val: 0.011
Factore-val(match)DB
SPI10.0000000089766JASPAR
IRF10.000000014092JASPAR
IRF20.00000018316JASPAR
GABPA0.000017641JASPAR
FEV0.000020513JASPAR

BED file downloads

Download top of 241 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr15: 96601760-96601910NR2F2-AS133.37
chr1: 160616820-160616970SLAMF735.76
chr1: 160616820-160616970RP11-404F10.235.76
chr1: 160616820-160616970CD8435.76
chr1: 160616820-160616970SLAMF135.76
chr1: 160616820-160616970CD4835.76
chr11: 75400960-75401110MAP635.88
chr11: 75400960-75401110CTD-2530H12.235.88
chr11: 75400960-75401110DGAT235.88
chr8: 82066080-82066230RP11-1149M10.240.2
View top connections.

Other

CodePlot