SOM cluster: 484

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 118
Promoter: 35%
CpG-Island: 18%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 36/100 | e-val: 0.00000068
Factore-val(match)DB
IRF10.00000029324JASPAR
IRF20.00000032538JASPAR
SPI10.0000025893JASPAR
SPIB0.000025791JASPAR
FEV0.00082308JASPAR
Sites: 25/100 | e-val: 0.069
Factore-val(match)DB
SP10.00000045768JASPAR
Pax40.0000096369JASPAR
RREB10.000033583JASPAR
Tal1::Gata10.0001208JASPAR
Klf40.0005053JASPAR

BED file downloads

Download top of 118 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 42195560-42195710IKBKB36.61
chr8: 42195560-42195710POLB36.61
chr19: 12099380-12099530RNA5SP46545.2
chr19: 12099380-12099530CTD-2006C1.245.2
chr19: 12099380-12099530CTD-2006C1.1045.2
chr19: 12099380-12099530ZNF70045.2
chr19: 12099380-12099530ZNF87845.2
chr6: 30525380-30525530SUCLA2P147.09
chr6: 30525380-30525530DHX1647.09
chr6: 30525380-30525530XXbac-BPG249D20.947.09
View top connections.

Other

CodePlot