SOM cluster: 487

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 74
Promoter: 19%
CpG-Island: 6%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/74 | e-val: 0.000000078
Factore-val(match)DB
EWSR1-FLI10.00000045687JASPAR
SP10.00000052008JASPAR
Pax40.000018344JASPAR
RREB10.00065473JASPAR
MZF1_1-40.0054137JASPAR

BED file downloads

Download top of 74 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr22: 19930240-19930390COMT44.63
chr19: 41193520-41193670NUMBL47.52
chr19: 41193520-41193670SNRPA47.52
chr19: 41197160-41197310SHKBP162
chr5: 158527080-158527230RP11-175K6.162.57
chr1: 182583880-182584030RGS1662.62
chr1: 182583880-182584030RP11-317P15.362.62
chr17: 38095980-38096130GSDMA69.8
chr1: 19717580-19717730CAPZB72.93
chr8: 38794525-38794675RP11-723D22.375
View top connections.

Other

CodePlot