SOM cluster: 498

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 169
Promoter: 6%
CpG-Island: 1%
Conserved: 68%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 60/100 | e-val: 6.7e-33
Factore-val(match)DB
NFE2L20.00000000083039JASPAR
AP10.0000000059763JASPAR
PPARG0.0052793JASPAR
NFE2L1::MafG0.011701JASPAR
Pax20.032591JASPAR
Sites: 19/100 | e-val: 0.00042
Factore-val(match)DB
TEAD10.00000054812JASPAR
SPIB0.0025969JASPAR
Stat30.0030193JASPAR
FEV0.0032399JASPAR
RUNX10.0034919JASPAR

BED file downloads

Download top of 169 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 45899980-45900130SNORA3145.67
chr13: 45899980-45900130TPT1-AS145.67
chr13: 45899980-45900130RP11-290D2.345.67
chr4: 8395460-8395610HTRA345.82
chr4: 8395460-8395610TRMT4445.82
chr8: 11732540-11732690FDFT148.92
chr8: 11732540-11732690CTSB48.92
chr1: 209981480-209981630TRAF3IP350.64
chr5: 149920600-149920750NDST153.51
chr5: 149920600-149920750RPS1453.51
View top connections.

Other

CodePlot