SOM cluster: 504

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 257
Promoter: 23%
CpG-Island: 58%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.000000080118JASPAR
TFAP2A0.000063107JASPAR
RREB10.00061831JASPAR
Klf40.0019013JASPAR
Pax40.0021696JASPAR
Sites: 56/100 | e-val: 0.000000000054
Factore-val(match)DB
TFAP2A0.000018937JASPAR
SP10.00097482JASPAR
Zfx0.0083307JASPAR
PPARG0.047397JASPAR
PLAG10.050603JASPAR
Sites: 54/100 | e-val: 0.000062
Factore-val(match)DB
SP10.0000024611JASPAR
EWSR1-FLI10.0000048985JASPAR
Pax40.00039764JASPAR
Pax50.0082453JASPAR
MZF1_1-40.013002JASPAR

BED file downloads

Download top of 257 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr18: 21199020-21199170ANKRD2934.06
chr9: 35828765-35828915GBA241.8
chr9: 35828765-35828915FAM221B41.8
chr2: 64836225-64836375AFTPH47.98
chr19: 10680380-10680530KEAP154.3
chr19: 10680380-10680530ATG4D54.3
chr19: 10680380-10680530KRI154.3
chr19: 10680380-10680530S1PR554.3
chr19: 10680380-10680530ILF354.3
chr19: 10680380-10680530SLC44A254.3
View top connections.

Other

CodePlot