SOM cluster: 505

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 275
Promoter: 27%
CpG-Island: 59%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 1.9e-38
Factore-val(match)DB
SP10.00000000003063JASPAR
Egr10.000026186JASPAR
Klf40.0012313JASPAR
TFAP2A0.0014157JASPAR
PLAG10.0014815JASPAR
Sites: 44/100 | e-val: 1.4
Factore-val(match)DB
SP10.000000052535JASPAR
Pax40.000027371JASPAR
Tal1::Gata10.002327JASPAR
EWSR1-FLI10.0026579JASPAR
MZF1_1-40.0032362JASPAR

BED file downloads

Download top of 275 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151103540-151103690LYSMD117.16
chr8: 124217665-124217815ZHX129.28
chr8: 21644525-21644675GFRA247.09
chr13: 99403720-99403870SLC15A150.74
chr5: 92785-92935PLEKHG4B54.53
chr1: 1289365-1289515ATAD3C56.25
chr1: 1289365-1289515RP4-758J18.256.25
chr1: 1289365-1289515CPSF3L56.25
chr1: 1289365-1289515AURKAIP156.25
chr1: 48462045-48462195RP4-683M8.257.9
View top connections.

Other

CodePlot