SOM cluster: 509

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 5677
Promoter: 1%
CpG-Island: 0%
Conserved: 21%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 3.4e-18
Factore-val(match)DB
Pax40.0000059284JASPAR
SP10.000016692JASPAR
EWSR1-FLI10.000064751JASPAR
RREB10.00052698JASPAR
Klf40.004512JASPAR
Sites: 25/100 | e-val: 0.000051
Factore-val(match)DB
Klf40.00034461JASPAR
SP10.0004261JASPAR
RXR::RAR_DR50.0074608JASPAR
Zfx0.0095166JASPAR
PPARG::RXRA0.011896JASPAR
Sites: 31/100 | e-val: 0.047
Factore-val(match)DB
Tcfcp2l10.0021709JASPAR
SP10.0024784JASPAR
Pax40.0043343JASPAR
Stat30.0092887JASPAR
INSM10.014071JASPAR

BED file downloads

Download top of 5677 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150185305-150185455snoU1318.8
chr9: 36845065-36845215PAX529.79
chr2: 135217245-135217395TMEM16341.34
chr16: 89962345-89962495AC092143.146.32
chr16: 89962345-89962495MC1R46.32
chr22: 40032785-40032935CACNA1I46.39
chr9: 127570165-127570315WDR3846.44
chr2: 71300085-71300235NAGK46.63
chr3: 12584005-12584155RNA5SP12349.01
chr3: 195868265-195868415TFRC49.14
View top connections.

Other

CodePlot