SOM cluster: 511

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3960
Promoter: 5%
CpG-Island: 5%
Conserved: 22%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 49/100 | e-val: 5.8e-25
Factore-val(match)DB
SP10.00000021493JASPAR
Pax40.0000026672JASPAR
PLAG10.000010451JASPAR
PPARG::RXRA0.00034277JASPAR
EWSR1-FLI10.00043627JASPAR
Sites: 35/100 | e-val: 0.00000000014
Factore-val(match)DB
PLAG10.0000000000024944JASPAR
EBF10.00014901JASPAR
TP530.00029855JASPAR
INSM10.0014056JASPAR
Zfp4230.0037261JASPAR
Sites: 30/100 | e-val: 0.00000000013
Factore-val(match)DB
SP10.00048739JASPAR
Tal1::Gata10.0035019JASPAR
SPI10.0076799JASPAR
INSM10.01179JASPAR
FEV0.014217JASPAR
Sites: 24/100 | e-val: 0.6
Factore-val(match)DB
Stat30.00033843JASPAR
INSM10.00044598JASPAR
SP10.00068722JASPAR
TP530.0016233JASPAR
EBF10.002938JASPAR

BED file downloads

Download top of 3960 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145456300-145456450RP11-458D21.120.45
chr10: 102880900-102881050RP11-31L23.328.13
chr10: 102880900-102881050RP11-324L3.128.13
chr10: 102880900-102881050PDZD728.13
chr3: 126664765-126664915PLXNA135.21
chr14: 50514400-50514550RP11-58E21.338.01
chr22: 48480425-48480575LL22NC03-121E8.340.24
chr17: 76434185-76434335SOCS340.7
chr9: 116355405-116355555RGS341.92
chr1: 161706145-161706295DUSP1244.2
View top connections.

Other

CodePlot