SOM cluster: 532

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 234
Promoter: 6%
CpG-Island: 0%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.00000086
Factore-val(match)DB
AP10.000000013364JASPAR
NFE2L20.00000051336JASPAR
PPARG0.0033626JASPAR
NR4A20.0035304JASPAR
Pax20.011843JASPAR

BED file downloads

Download top of 234 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 76325940-76326090DNAH1743.33
chr3: 73143520-73143670PPP4R256.92
chr6: 36737205-36737355CDKN1A58.34
chr6: 36737205-36737355PPIL158.34
chr17: 44872825-44872975WNT359.71
chr17: 44872825-44872975NSF59.71
chr9: 116326885-116327035RP11-168K11.260.7
chr11: 63749700-63749850RP11-21A7A.462.28
chr20: 61347540-61347690SLCO4A163.58
chr20: 61347540-61347690LINC0068663.58
View top connections.

Other

CodePlot