SOM cluster: 541

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 116
Promoter: 1%
CpG-Island: 3%
Conserved: 71%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 1.8e-18
Factore-val(match)DB
FEV0.000000000053379JASPAR
Stat30.0000000082791JASPAR
ELF50.0000045377JASPAR
SPI10.0000049521JASPAR
ELK10.000022606JASPAR
Sites: 41/100 | e-val: 0.000011
Factore-val(match)DB
HNF4A0.0000000000012217JASPAR
NR1H2::RXRA0.0000000000015651JASPAR
NR2F10.0000000000017831JASPAR
PPARG::RXRA0.0000000000029288JASPAR
NR4A20.0000000088678JASPAR
Sites: 19/100 | e-val: 0.0061
Factore-val(match)DB
SP10.000000070865JASPAR
Pax40.00000084747JASPAR
MZF1_5-130.00044199JASPAR
RREB10.00078308JASPAR
EWSR1-FLI10.0048947JASPAR
Sites: 36/100 | e-val: 0.45
Factore-val(match)DB
FOXA10.00000000092183JASPAR
FOXO30.000000038283JASPAR
Foxa20.00000011433JASPAR
FOXD10.00000077058JASPAR
FOXF20.0012371JASPAR

BED file downloads

Download top of 116 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 82171160-82171310TSPAN1442.13
chr10: 82171160-82171310FAM213A42.13
chr11: 61449680-61449830DAGLA56.18
chr9: 116372080-116372230RGS360.84
chr9: 116372080-116372230RP11-168K11.260.84
chr1: 155101565-155101715EFNA462.45
chr1: 155101565-155101715ADAM1562.45
chr1: 155101565-155101715EFNA162.45
chr1: 155101565-155101715RP11-263K19.462.45
chr7: 116141620-116141770CAV262.52
View top connections.

Other

CodePlot