SOM cluster: 542

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 98
Promoter: 4%
CpG-Island: 0%
Conserved: 52%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/98 | e-val: 0.00000000036
Factore-val(match)DB
Foxd30.000000042317JASPAR
FOXI10.000060868JASPAR
Foxq10.00016097JASPAR
FOXA10.00078408JASPAR
FOXF20.001591JASPAR
Sites: 21/98 | e-val: 0.00000000027
Factore-val(match)DB
TLX1::NFIC0.00000000099212JASPAR
NFIC0.0028105JASPAR
REL0.0060407JASPAR
znf1430.0086256JASPAR
E2F10.015058JASPAR

BED file downloads

Download top of 98 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 4719980-4720130LINC0070417.29
chr7: 106820940-106821090HBP138.79
chr3: 147876100-147876250HNRNPA1P2052.68
chr3: 134164620-134164770AMOTL258.52
chr3: 149113600-149113750TM4SF160.09
chr3: 149113600-149113750RP11-2G17.160.09
chr3: 149113600-149113750TM4SF1860.09
chr1: 234679865-234680015RP4-781K5.270.61
chr7: 95179540-95179690PDK470.97
chr7: 95179540-95179690AC002451.370.97
View top connections.

Other

CodePlot