SOM cluster: 546

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 148
Promoter: 6%
CpG-Island: 0%
Conserved: 64%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.0000043
Factore-val(match)DB
Pax40.00000000007104JASPAR
RREB10.000000062897JASPAR
SP10.0000004759JASPAR
MZF1_5-130.0028698JASPAR
Klf40.0030422JASPAR
Sites: 19/100 | e-val: 0.011
Factore-val(match)DB
TP530.0009854JASPAR
INSM10.0028185JASPAR
Klf40.0037864JASPAR
Egr10.008712JASPAR
Hand1::Tcfe2a0.013499JASPAR
Sites: 29/100 | e-val: 0.2
Factore-val(match)DB
AP10.00000000022001JASPAR
NFE2L20.000000014738JASPAR
PBX10.0046229JASPAR
PPARG0.0049795JASPAR
NFE2L1::MafG0.0050858JASPAR

BED file downloads

Download top of 148 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 230985360-230985510C1orf19840.46
chr1: 230985360-230985510RN7SL837P40.46
chr17: 76922040-76922190C1QTNF148.11
chr3: 129315240-129315390PLXND152.88
chr1: 151286760-151286910ZNF68759.77
chr1: 151286760-151286910PSMB459.77
chr1: 151286760-151286910RFX559.77
chr1: 151286760-151286910RP11-126K1.859.77
chr1: 151286760-151286910SELENBP159.77
chr1: 151286760-151286910RP11-126K1.259.77
View top connections.

Other

CodePlot