SOM cluster: 552

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 216
Promoter: 40%
CpG-Island: 77%
Conserved: 64%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
SP10.0000040493JASPAR
TFAP2A0.0013029JASPAR
PLAG10.003237JASPAR
NHLH10.01852JASPAR
Egr10.040629JASPAR
Sites: 83/100 | e-val: 0.000000000000023
Factore-val(match)DB
SP10.00000011765JASPAR
CTCF0.001217JASPAR
TFAP2A0.0058403JASPAR
PLAG10.01187JASPAR
Klf40.023173JASPAR

BED file downloads

Download top of 216 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 73872480-73872630MRPL3850.8
chr17: 16256945-16257095PIGL51.08
chr17: 16256945-16257095CENPV51.08
chr17: 16256945-16257095UBB51.08
chr12: 112820360-112820510RPL658.73
chr1: 1235525-1235675MXRA862.12
chr1: 17027645-17027795CROCCP262.66
chr12: 124246500-124246650ATP6V0A263.34
chr16: 2178380-2178530MLST863.77
chr16: 2178380-2178530SLC9A3R263.77
View top connections.

Other

CodePlot