SOM cluster: 554

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 133
Promoter: 13%
CpG-Island: 8%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 53/100 | e-val: 1.7e-37
Factore-val(match)DB
SP10.000000000011461JASPAR
Pax40.00034441JASPAR
INSM10.00053612JASPAR
PPARG::RXRA0.0024393JASPAR
Klf40.0030883JASPAR

BED file downloads

Download top of 133 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 204328880-204329030PLEKHA650.47
chr17: 75538220-75538370SEPT950.92
chr9: 130625005-130625155ST6GALNAC653.76
chr9: 130625005-130625155FAM102A53.76
chr1: 170018480-170018630KIFAP354
chr19: 48547320-48547470CABP557.98
chr19: 55954665-55954815ZNF62872.42
chr22: 30130080-30130230NF278
chr16: 4573060-4573210HMOX279.79
chr16: 4573060-4573210UBALD179.79
View top connections.

Other

CodePlot