SOM cluster: 556

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 563
Promoter: 23%
CpG-Island: 27%
Conserved: 35%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 72/100 | e-val: 0.000000000000069
Factore-val(match)DB
SP10.0000002312JASPAR
EWSR1-FLI10.00004526JASPAR
Pax40.00011754JASPAR
Klf40.00014667JASPAR
RREB10.00073816JASPAR

BED file downloads

Download top of 563 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145473225-145473375ITGA1013.04
chr1: 145473225-145473375GNRHR213.04
chr19: 11990825-11990975ZNF6939.94
chr6: 27279805-27280035ZNF204P45.66
chr6: 27279805-27280035ZNF39145.66
chr12: 121022225-121022375COQ546.96
chr6: 49519085-49519235RHAG49.09
chr6: 49519085-49519235C6orf14149.09
chr3: 27764565-27764715AC098973.253.52
chr17: 74502305-74502455UBE2O53.75
View top connections.

Other

CodePlot