SOM cluster: 559

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1181
Promoter: 23%
CpG-Island: 76%
Conserved: 64%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 90/100 | e-val: 0
Factore-val(match)DB
SP10.0000002365JASPAR
TFAP2A0.00039597JASPAR
Klf40.0010518JASPAR
PLAG10.0013643JASPAR
Zfx0.0016997JASPAR
Sites: 69/100 | e-val: 8.8e-25
Factore-val(match)DB
TFAP2A0.0000070617JASPAR
SP10.00079131JASPAR
Zfx0.0014596JASPAR
Klf40.0032558JASPAR
NHLH10.030826JASPAR

BED file downloads

Download top of 1181 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92495520-92495670GAPDHP4629.02
chr19: 33794680-33794830CEBPA33.12
chr19: 33794680-33794830AC008738.133.12
chr1: 151104460-151104610MLLT1141.53
chr1: 151104460-151104610TMOD441.53
chr1: 202611765-202611915SYT242.48
chr6: 124124420-124124570RP11-374A22.144.12
chr3: 184099565-184099715PSMD247.95
chr15: 89914845-89914995POLG52.11
chr11: 64879705-64879855CDCA553.27
View top connections.

Other

CodePlot