SOM cluster: 563

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 365
Promoter: 1%
CpG-Island: 0%
Conserved: 92%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
CTCF0.000000000000078493JASPAR
RXR::RAR_DR50.00005561JASPAR
Zfp4230.00035806JASPAR
PLAG10.00066414JASPAR
En10.0012146JASPAR
Sites: 79/100 | e-val: 2.90069e-43
Factore-val(match)DB
Foxq10.000044014JASPAR
Lhx30.000094785JASPAR
Foxd30.0013226JASPAR
Prrx20.0020229JASPAR
ARID3A0.0052395JASPAR
Sites: 92/100 | e-val: 0.1
Factore-val(match)DB
IRF10.00088078JASPAR
FOXA10.0010563JASPAR
Foxd30.0015333JASPAR
SRY0.0045654JASPAR
Lhx30.0053838JASPAR

BED file downloads

Download top of 365 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 116071600-116071750RNF18341.89
chr9: 116071600-116071750FKBP1541.89
chr18: 61630960-61631110SERPINB849.76
chr12: 104278180-104278330NT5DC350.74
chr2: 63919300-63919450MDH150.81
chr2: 63919300-63919450HNRNPA1P6650.81
chr14: 39484680-39484830LINC0063952.28
chr3: 171284740-171284890PLD152.99
chrX: 114877340-114877490RP1-241P17.157.25
chr12: 25394240-25394390LYRM557.5
View top connections.

Other

CodePlot