SOM cluster: 571

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 195
Promoter: 2%
CpG-Island: 0%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.0000026
Factore-val(match)DB
CEBPA0.000000048237JASPAR
HLF0.000055368JASPAR
T0.00025492JASPAR
NFIL30.00028771JASPAR
Pou5f10.00031142JASPAR

BED file downloads

Download top of 195 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 106503320-106503470RP5-884M6.146.24
chr12: 2404265-2404415CACNA1C-AS458.56
chr6: 11713080-11713230RN7SL145P59.05
chr6: 11713080-11713230ADTRP59.05
chr2: 149942060-149942210LYPD6B60.9
chr5: 155900400-155900550SGCD65.45
chr16: 88123480-88123630BANP69.63
chr9: 82226340-82226490TLE469.69
chr9: 82226340-82226490RP11-375O18.269.69
chr3: 58336460-58336610PXK70.13
View top connections.

Other

CodePlot