SOM cluster: 579

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 510
Promoter: 5%
CpG-Island: 0%
Conserved: 17%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.046
Factore-val(match)DB
Pax40.00000033557JASPAR
SPI10.00000038974JASPAR
SPIB0.000024116JASPAR
GABPA0.00088842JASPAR
FEV0.00089179JASPAR

BED file downloads

Download top of 510 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr16: 11358220-11358370snoU1331.32
chr7: 45020640-45020790MYO1G33.77
chr7: 45020640-45020790SNHG1533.77
chr12: 7068000-7068150LRRC2345.39
chr12: 7068000-7068150RPL13P545.39
chr1: 156124440-156124590SEMA4A46.01
chr1: 156124440-156124590LAMTOR246.01
chr3: 169756840-169756990GPR16052.51
chr3: 169756840-169756990RP11-379K17.952.51
chr22: 42836120-42836270NFAM154.98
View top connections.

Other

CodePlot