SOM cluster: 590

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 101
Promoter: 9%
CpG-Island: 9%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.0000000029
Factore-val(match)DB
TP530.00017981JASPAR
REST0.0097672JASPAR
SP10.016544JASPAR
NFIC0.073066JASPAR
Hand1::Tcfe2a0.081451JASPAR
Sites: 31/100 | e-val: 0.00000011
Factore-val(match)DB
Pax40.0000000081479JASPAR
SP10.000000086347JASPAR
PLAG10.000038298JASPAR
RREB10.000064686JASPAR
MZF1_1-40.0034509JASPAR

BED file downloads

Download top of 101 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 35485940-35486090SCN1B49.46
chr19: 35485940-35486090ZNF79249.46
chr19: 35485940-35486090GRAMD1A49.46
chr19: 35532080-35532230HPN52.31
chr2: 86525880-86526030REEP160.67
chr1: 207985420-207985570C1orf13261.33
chr1: 207985420-207985570CD4661.33
chr1: 207985420-207985570CD3461.33
chr17: 58468340-58468490USP3261.92
chr15: 96882665-96882815NR2F262.58
View top connections.

Other

CodePlot