SOM cluster: 594

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 133
Promoter: 1%
CpG-Island: 0%
Conserved: 70%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 0.00000000000011
Factore-val(match)DB
Foxa20.000000076223JASPAR
Foxd30.0000010501JASPAR
FOXI10.000011605JASPAR
Foxq10.00002433JASPAR
FOXA10.000042874JASPAR
Sites: 44/100 | e-val: 0.00000000000033
Factore-val(match)DB
NFATC20.000044808JASPAR
AP10.0011061JASPAR
RELA0.0039182JASPAR
NFE2L20.0054938JASPAR
Foxa20.005976JASPAR

BED file downloads

Download top of 133 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 156025660-156025810KCNAB145.61
chr13: 100752680-100752830NDUFA12P145.73
chr9: 116692100-116692250ZNF61848.56
chr7: 115994280-115994430CAV250.9
chr2: 64291740-64291890AC074289.153.78
chr1: 55595120-55595270USP2458.56
chr6: 7992920-7993070TXNDC561.13
chr6: 7992920-7993070BLOC1S5-TXNDC561.13
chr3: 146026100-146026250PLSCR464.56
chr17: 2075740-2075890SMG666.98
View top connections.

Other

CodePlot