SOM cluster: 599

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 159
Promoter: 2%
CpG-Island: 0%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 73/100 | e-val: 0
Factore-val(match)DB
AP10.000000000018965JASPAR
NFE2L20.0000000052909JASPAR
PPARG0.0032339JASPAR
NFE2L1::MafG0.0051856JASPAR
Foxa20.013136JASPAR
Sites: 19/100 | e-val: 0.85
Factore-val(match)DB
AP10.00000081582JASPAR
PBX10.00017219JASPAR
NFE2L20.00051669JASPAR
HOXA50.00068882JASPAR
Pax50.0011775JASPAR
Sites: 15/100 | e-val: 0.9
Factore-val(match)DB
FOXA10.00050316JASPAR
SPIB0.00069521JASPAR
EWSR1-FLI10.0011487JASPAR
REL0.011944JASPAR
NR1H2::RXRA0.020564JASPAR

BED file downloads

Download top of 159 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 54798540-54798690RGS2045.5
chr8: 54798540-54798690RP11-30L15.445.5
chr5: 172205240-172205390DUSP145.55
chr5: 172205240-172205390RP11-779O18.345.55
chr22: 39970900-39971050MGAT349.45
chr22: 39970900-39971050RPS19BP149.45
chr22: 39970900-39971050RP5-1104E15.649.45
chr11: 14358800-14358950RRAS252.67
chr1: 65889760-65889910LEPROT58.44
chr3: 47952380-47952530MAP458.67
View top connections.

Other

CodePlot