SOM cluster: 610

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 391
Promoter: 26%
CpG-Island: 90%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.00060605JASPAR
Klf40.00081251JASPAR
TFAP2A0.0051455JASPAR
NHLH10.0077114JASPAR
Zfx0.0090228JASPAR
Sites: 47/100 | e-val: 0.0063
Factore-val(match)DB
TFAP2A0.0000081519JASPAR
SP10.00089255JASPAR
Klf40.005029JASPAR
ELK40.0094606JASPAR
GABPA0.013244JASPAR

BED file downloads

Download top of 391 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 176561545-176561695ZNF34642.07
chr1: 951560-951710RP11-54O7.346.12
chr12: 117627540-117627690RP11-103B5.246.91
chr12: 117627540-117627690TESC46.91
chr10: 15902020-15902170snoU1351.63
chr8: 60031620-60031770TOX51.94
chr10: 88731385-88731535RNU1-19P53.74
chr19: 16189185-16189335CIB353.96
chr1: 16767880-16768030SPATA2155.2
chr1: 16767880-16768030NECAP255.2
View top connections.

Other

CodePlot