SOM cluster: 613

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 296
Promoter: 4%
CpG-Island: 0%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 32/100 | e-val: 0.69
Factore-val(match)DB
Evi10.00057088JASPAR
Gata10.00058108JASPAR
ARID3A0.00081454JASPAR
Prrx20.035147JASPAR
GATA20.043641JASPAR

BED file downloads

Download top of 296 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 182175880-182176030GS1-122H1.245.31
chr2: 55367760-55367910MTIF247.64
chr8: 96224820-96224970NDUFAF649.43
chr11: 66469000-66469150RBM4B49.54
chr11: 66469000-66469150RBM14-RBM449.54
chr11: 66469000-66469150RBM449.54
chr11: 66469000-66469150CCS49.54
chr11: 66469000-66469150RBM1449.54
chr3: 183067440-183067590MCF2L253.09
chr5: 79488080-79488230SERINC554.35
View top connections.

Other

CodePlot