SOM cluster: 62

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 137
Promoter: 16%
CpG-Island: 10%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.0000000029
Factore-val(match)DB
Pax40.00000041082JASPAR
SP10.000022346JASPAR
EWSR1-FLI10.00010523JASPAR
RREB10.0042723JASPAR
Tal1::Gata10.0068291JASPAR
Sites: 29/100 | e-val: 0.0064
Factore-val(match)DB
NFKB10.00083574JASPAR
NF-kappaB0.0011487JASPAR
SP10.0018438JASPAR
SPI10.0036836JASPAR
FEV0.0037291JASPAR

BED file downloads

Download top of 137 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 221342960-221343110RP11-453O22.138.58
chr9: 22011020-22011170C9orf5342.01
chr11: 100590140-100590290ARHGAP4245.65
chr12: 89845640-89845790DUSP646.01
chr1: 67217960-67218110SGIP146.58
chr1: 67217960-67218110TCTEX1D146.58
chr8: 8241945-8242095SGK22350.63
chrX: 50557065-50557215BMP1553.84
chr16: 82660980-82661130CDH1354.81
chr2: 62638720-62638870TMEM1759.44
View top connections.

Other

CodePlot