SOM cluster: 621

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 186
Promoter: 45%
CpG-Island: 17%
Conserved: 39%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 0.000000000071
Factore-val(match)DB
IRF10.000000000002488JASPAR
IRF20.000000000034918JASPAR
FOXF20.0024711JASPAR
SRY0.013496JASPAR
FOXA10.020382JASPAR

BED file downloads

Download top of 186 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145589600-145589750POLR3C17.66
chr1: 145589600-145589750NUDT1717.66
chr1: 145589600-145589750RBM8A17.66
chr12: 4430700-4430850RP11-264F23.141.89
chr10: 124740300-124740450IKZF554.55
chr10: 124740300-124740450FAM24A54.55
chr12: 72149220-72149370ZFC3H156.06
chr12: 72149220-72149370TMEM1956.06
chr12: 72149220-72149370RP11-293I14.256.06
chr12: 14923660-14923810WBP1156.11
View top connections.

Other

CodePlot