SOM cluster: 627

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 416
Promoter: 2%
CpG-Island: 0%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 20/100 | e-val: 0.0011
Factore-val(match)DB
NFE2L20.000000015255JASPAR
AP10.00000024363JASPAR
NFE2L1::MafG0.0034165JASPAR
Spz10.047495JASPAR
RORA_10.05428JASPAR

BED file downloads

Download top of 416 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr14: 52327700-52327850RP11-280K24.440.4
chr14: 52327700-52327850RP11-463J10.240.4
chr9: 115517360-115517510KIAA195844.76
chr9: 115517360-115517510SNX3044.76
chr15: 102166340-102166490snoU1351.48
chr1: 192846760-192846910RGS253
chr4: 41979860-41980010RP11-457P14.557.51
chr11: 131928460-131928610NTM59.17
chr11: 131928460-131928610RP11-697E14.259.17
chr5: 112249100-112249250REEP560.79
View top connections.

Other

CodePlot