SOM cluster: 629

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1303
Promoter: 41%
CpG-Island: 10%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 27/100 | e-val: 0.18
Factore-val(match)DB
SP10.00009731JASPAR
Pax40.00023212JASPAR
Klf40.00028575JASPAR
RREB10.00030065JASPAR
Tal1::Gata10.00033014JASPAR

BED file downloads

Download top of 1303 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 127532625-127532775ARPC5L34.21
chr9: 127532625-127532775OLFML2A34.21
chr9: 127532625-127532775MIR181A234.21
chr9: 127532625-127532775RPL3534.21
chr9: 127532625-127532775MIR181A2HG34.21
chr3: 38180700-38180850ACAA135.33
chr9: 139620040-139620190ATP6V1G1P342.21
chr9: 139620040-139620190SNHG742.21
chr19: 10829440-10829590MIR199A142.89
chr1: 183442320-183442470NCF244.05
View top connections.

Other

CodePlot