SOM cluster: 631

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1977
Promoter: 2%
CpG-Island: 0%
Conserved: 14%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 12/100 | e-val: 0.03
Factore-val(match)DB
EWSR1-FLI10.000000026105JASPAR
SP10.0000086457JASPAR
Tal1::Gata10.00031279JASPAR
Pax40.00060463JASPAR
SPIB0.0022031JASPAR

BED file downloads

Download top of 1977 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 106193100-106193250CTB-111H14.139.62
chr12: 93843200-93843350UBE2N42.43
chr1: 154916660-154916810PBXIP148.8
chr1: 154916660-154916810SHC148.8
chr12: 102249900-102250050HSPE1P449.88
chr8: 102258500-102258650ZNF70651.67
chr15: 101782720-101782870SNRPA152.61
chr7: 38322820-38322970TRGV953.72
chr7: 38322820-38322970TRGC153.72
chr7: 38322820-38322970TRGJP153.72
View top connections.

Other

CodePlot