SOM cluster: 632

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 135
Promoter: 41%
CpG-Island: 25%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 14/100 | e-val: 0
Factore-val(match)DB
MEF2A0.00091307JASPAR
NFATC20.0081716JASPAR
FOXO30.0091713JASPAR
T0.02534JASPAR
NFE2L20.038313JASPAR
Sites: 14/100 | e-val: 0.000000028
Factore-val(match)DB
RXRA::VDR0.0012415JASPAR
REST0.0032475JASPAR
EWSR1-FLI10.0093744JASPAR
RXR::RAR_DR50.0094143JASPAR
PPARG0.0097702JASPAR
Sites: 11/100 | e-val: 0.28
Factore-val(match)DB
Egr10.031239JASPAR
MYC::MAX0.037956JASPAR
SPIB0.039031JASPAR
Myb0.047296JASPAR
NHLH10.075108JASPAR
Sites: 9/100 | e-val: 0.0037
Factore-val(match)DB
TFAP2A0.010754JASPAR
SP10.021194JASPAR
ESR10.023621JASPAR
TLX1::NFIC0.026233JASPAR
Myb0.033834JASPAR
Sites: 7/100 | e-val: 0.079
Factore-val(match)DB
Stat30.00049599JASPAR
FEV0.010432JASPAR
SPI10.011185JASPAR
PLAG10.032923JASPAR
RXR::RAR_DR50.070611JASPAR

BED file downloads

Download top of 135 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149214765-149214915RP11-403I13.419.64
chr1: 149214765-149214915RP11-403I13.619.64
chr1: 150134460-150134610ANP32E30.12
chr1: 150134460-150134610snoU1330.12
chr1: 149783760-149783910BOLA144.25
chr1: 149783760-149783910HIST2H2AB44.25
chr1: 149783760-149783910HIST2H2BE44.25
chr5: 180648600-180648750OR2V246.5
chr5: 180648600-180648750CTC-338M12.646.5
chr6: 26184045-26184195HIST1H3E46.95
View top connections.

Other

CodePlot