SOM cluster: 644

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 154
Promoter: 4%
CpG-Island: 0%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 30/100 | e-val: 0.00000024
Factore-val(match)DB
TLX1::NFIC0.000000084675JASPAR
NFIC0.00071611JASPAR
INSM10.005454JASPAR
E2F10.063083JASPAR
ESR10.063211JASPAR

BED file downloads

Download top of 154 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 102405400-102405550GRHL246.37
chr2: 64631185-64631335AC008074.347.53
chr11: 4046960-4047110RRM147.56
chr17: 1989020-1989170SMG648.27
chr17: 1989020-1989170HIC148.27
chr9: 129798260-129798410ANGPTL254.37
chr17: 62392660-62392810POLG256.6
chr3: 48542220-48542370CCDC5157.11
chr3: 48542220-48542370SHISA557.11
chr3: 48542220-48542370UQCRC157.11
View top connections.

Other

CodePlot