SOM cluster: 654

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 289
Promoter: 18%
CpG-Island: 33%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 46/100 | e-val: 2.9e-23
Factore-val(match)DB
SP10.0000000011837JASPAR
Pax40.000041488JASPAR
EWSR1-FLI10.000080739JASPAR
MZF1_1-40.0045751JASPAR
PLAG10.0062609JASPAR
Sites: 45/100 | e-val: 0.000005
Factore-val(match)DB
SP10.0000032578JASPAR
EWSR1-FLI10.00020509JASPAR
PPARG::RXRA0.00034313JASPAR
Pax50.0023262JASPAR
Pax40.020163JASPAR

BED file downloads

Download top of 289 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151118560-151118710MLLT1114.48
chr1: 151118560-151118710TMOD414.48
chr1: 204165240-204165390PLEKHA643.89
chr1: 204165240-204165390ETNK243.89
chr2: 120189680-120189830SCTR45.26
chr9: 131313445-131313595SPTAN149.82
chr8: 41625465-41625615ANK153.68
chr2: 127414340-127414490GYPC54.91
chr2: 127414340-127414490RNU6-675P54.91
chr3: 49211125-49211275KLHDC8B58.2
View top connections.

Other

CodePlot