SOM cluster: 660

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 7075
Promoter: 1%
CpG-Island: 3%
Conserved: 20%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 6.6e-26
Factore-val(match)DB
SP10.00000095603JASPAR
INSM10.00003312JASPAR
PPARG::RXRA0.000073165JASPAR
TLX1::NFIC0.0027044JASPAR
HNF4A0.0047247JASPAR
Sites: 38/100 | e-val: 0.00000000088
Factore-val(match)DB
PLAG10.00090981JASPAR
INSM10.0047713JASPAR
Zfp4230.008252JASPAR
REST0.023833JASPAR
Egr10.051277JASPAR
Sites: 50/100 | e-val: 0.00014
Factore-val(match)DB
Pax40.00000010939JASPAR
SP10.00000077517JASPAR
RREB10.0000095093JASPAR
PLAG10.00025833JASPAR
Tal1::Gata10.00070704JASPAR
Sites: 22/100 | e-val: 0.0016
Factore-val(match)DB
Pax40.0000070772JASPAR
RREB10.000053614JASPAR
Klf40.00043297JASPAR
SP10.0036321JASPAR
Egr10.0045832JASPAR
Sites: 20/100 | e-val: 0.9
Factore-val(match)DB
EBF10.00001672JASPAR
CTCF0.00011624JASPAR
ZEB10.00023146JASPAR
Zfp4230.00078069JASPAR
TFAP2A0.00096695JASPAR

BED file downloads

Download top of 7075 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149890305-149890455SV2A18.21
chr1: 145587625-145587775POLR3C22.88
chr1: 145587625-145587775RNF11522.88
chr22: 21810020-21810170RIMBP3C26.21
chr22: 21810020-21810170RN7SKP22126.21
chr9: 133914720-133914870RP11-544A12.438.4
chr9: 133914720-133914870RNU6-881P38.4
chr4: 8590145-8590295RP11-689P11.238.92
chr3: 50459165-50459315NPRL243.95
chr3: 38163785-38163935OXSR143.97
View top connections.

Other

CodePlot