SOM cluster: 664

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 329
Promoter: 9%
CpG-Island: 2%
Conserved: 24%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 2e-18
Factore-val(match)DB
SPI10.0000000034041JASPAR
SPIB0.00000012212JASPAR
FEV0.0000059451JASPAR
ELF50.000044767JASPAR
IRF10.00015292JASPAR
Sites: 14/100 | e-val: 0.0034
Factore-val(match)DB
EWSR1-FLI10.00000037725JASPAR
Pax40.00000042175JASPAR
SP10.0000011075JASPAR
Tal1::Gata10.0000025878JASPAR
Klf40.0002652JASPAR

BED file downloads

Download top of 329 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 33913540-33913690RP11-646J21.253.88
chr9: 134148365-134148515FAM78A55.84
chr9: 134148365-134148515PPAPDC355.84
chr19: 33162880-33163030ANKRD2759.16
chr19: 33162880-33163030RGS9BP59.16
chr11: 69216600-69216750AP000439.159.22
chrX: 119156000-119156150NKAP59.7
chr19: 24006900-24007050RPSAP5860.18
chr19: 24006900-24007050ZNF72660.18
chr19: 24006900-24007050RP11-255H23.260.18
View top connections.

Other

CodePlot