SOM cluster: 671

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 386
Promoter: 14%
CpG-Island: 4%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.000000000000031
Factore-val(match)DB
EWSR1-FLI10.00000000000015776JASPAR
Pax40.00000056816JASPAR
SP10.00000431JASPAR
SPI10.0000229JASPAR
FEV0.0022677JASPAR
Sites: 26/100 | e-val: 0.000000097
Factore-val(match)DB
EWSR1-FLI10.000000011426JASPAR
SP10.000013426JASPAR
Tal1::Gata10.00014962JASPAR
Pax40.0006246JASPAR
RXR::RAR_DR50.0012102JASPAR

BED file downloads

Download top of 386 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 3156040-3156190CELF555.88
chr1: 145443020-145443170TXNIP55.88
chr11: 65210540-65210690FRMD858.49
chr6: 32077080-32077230TNXB58.88
chr1: 54869425-54869575RP4-705F19.164.69
chr3: 37499260-37499410ITGA965.67
chr6: 41907800-41907950CCND368.17
chr6: 41907800-41907950BYSL68.17
chr19: 11998340-11998490ZNF43968.27
chr19: 11998340-11998490ZNF6968.27
View top connections.

Other

CodePlot