SOM cluster: 676

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 263
Promoter: 2%
CpG-Island: 0%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 50/100 | e-val: 4.7e-19
Factore-val(match)DB
SPI10.000000014893JASPAR
FEV0.0000027823JASPAR
SPIB0.0000316JASPAR
ELF50.000034282JASPAR
EWSR1-FLI10.000047927JASPAR
Sites: 21/100 | e-val: 0.2
Factore-val(match)DB
MEF2A0.00080262JASPAR
Pou5f10.0024517JASPAR
ARID3A0.0036288JASPAR
NFATC20.0044146JASPAR
Sox20.010444JASPAR

BED file downloads

Download top of 263 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 141811300-141811450MGAM37.38
chr12: 57512720-57512870STAT656.84
chr9: 93908960-93909110RP11-305L7.367.41
chr9: 93908960-93909110LINC0048467.41
chr6: 137608180-137608330IFNGR167.41
chr8: 38660800-38660950RP11-723D22.270.07
chr6: 138096480-138096630TNFAIP371.32
chr6: 2952060-2952210SERPINB8P175.09
chr4: 154668580-154668730RP11-153M7.377.39
chr7: 38283060-38283210TRGC178.84
View top connections.

Other

CodePlot