SOM cluster: 685

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 162
Promoter: 3%
CpG-Island: 3%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 22/100 | e-val: 0.00000000029
Factore-val(match)DB
Tal1::Gata10.00027236JASPAR
SPIB0.00093712JASPAR
RXR::RAR_DR50.0014182JASPAR
Sox20.0017009JASPAR
EWSR1-FLI10.002195JASPAR
Sites: 26/100 | e-val: 0.0006
Factore-val(match)DB
SP10.0000000000092576JASPAR
Klf40.000022993JASPAR
Egr10.0031924JASPAR
Pax40.010801JASPAR
RREB10.017991JASPAR
Sites: 19/100 | e-val: 0.0066
Factore-val(match)DB
FEV0.00000021354JASPAR
Stat30.00011163JASPAR
SPI10.00079025JASPAR
FOXD10.00084738JASPAR
Tal1::Gata10.00096908JASPAR

BED file downloads

Download top of 162 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 94020520-94020670FNBP1L33.29
chr1: 94020520-94020670RNA5SP5333.29
chr5: 115700720-115700870CTC-339F2.244.11
chr12: 131714700-131714850GPR13347.19
chr9: 139557465-139557615FAM69B51.66
chr9: 139557465-139557615EGFL751.66
chr17: 43523600-43523750ARHGAP2757.17
chr1: 206554380-206554530SRGAP265.85
chr10: 17467960-17468110ST8SIA671.32
chr8: 74669700-74669850STAU271.63
View top connections.

Other

CodePlot