SOM cluster: 689

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 844
Promoter: 1%
CpG-Island: 0%
Conserved: 35%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 0.000000053
Factore-val(match)DB
Foxd30.00000010709JASPAR
Foxq10.0000047364JASPAR
FOXF20.000008421JASPAR
SRY0.000050951JASPAR
Sox50.00026555JASPAR
Sites: 37/100 | e-val: 8.9e-19
Factore-val(match)DB
FEV0.000001706JASPAR
SPIB0.0000072833JASPAR
Stat30.001287JASPAR
ELK40.0032712JASPAR
SPI10.003331JASPAR

BED file downloads

Download top of 844 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 39752460-39752610RALA24.73
chr15: 95869940-95870090CTD-2536I1.140.35
chr4: 40925685-40925835Y_RNA44.55
chr4: 2895520-2895670NOP14-AS146.65
chr4: 2895520-2895670GRK446.65
chr8: 38623260-38623410Y_RNA50.02
chr8: 38623260-38623410RP11-723D22.250.02
chr8: 38623260-38623410TACC150.02
chr9: 34024580-34024730UBAP250.09
chr8: 79450340-79450490PKIA50.71
View top connections.

Other

CodePlot