SOM cluster: 701

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 149
Promoter: 5%
CpG-Island: 0%
Conserved: 39%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.00000097
Factore-val(match)DB
ARID3A0.00014328JASPAR
Pdx10.00062635JASPAR
HOXA50.004982JASPAR
Prrx20.0075159JASPAR
GATA20.015546JASPAR

BED file downloads

Download top of 149 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 178620960-178621110RALGPS269.46
chr5: 149324360-149324510AC008427.270.75
chr5: 149324360-149324510PDE6A70.75
chr6: 12170660-12170810HIVEP175.45
chr1: 201690745-201690895RP11-25B7.178.6
chr17: 505660-505810RPS4XP1780.93
chr14: 21818800-21818950RPGRIP183.04
chr3: 52502420-52502570RP11-168J18.684.26
chr3: 52502420-52502570NISCH84.26
chr2: 242834680-242834830AC093642.393.12
View top connections.

Other

CodePlot