SOM cluster: 702

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 168
Promoter: 5%
CpG-Island: 6%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 6.2e-24
Factore-val(match)DB
Tal1::Gata10.00000031209JASPAR
Gata10.0000098051JASPAR
Evi10.000024498JASPAR
SRF0.0035723JASPAR
GATA20.010706JASPAR
Sites: 56/100 | e-val: 1.4e-17
Factore-val(match)DB
SP10.00001238JASPAR
PLAG10.00019687JASPAR
Myf0.0081705JASPAR
Pax40.0090887JASPAR
EWSR1-FLI10.010061JASPAR
Sites: 47/100 | e-val: 0.0000000013
Factore-val(match)DB
SP10.0021684JASPAR
INSM10.018339JASPAR
Myf0.024795JASPAR
REL0.066399JASPAR
Klf40.067897JASPAR

BED file downloads

Download top of 168 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 135967100-135967250RBMX55.37
chrX: 135967100-135967250RP11-1114A5.455.37
chr12: 49627020-49627170PRPH66.76
chr4: 48485100-48485250SLC10A468.53
chr17: 74402120-74402270RHBDF271.2
chr17: 74402120-74402270RPL7P4971.2
chr17: 77753185-77753335CBX873.21
chr17: 77753185-77753335CBX273.21
chr10: 1195880-1196030LINC0020075.67
chr1: 156882940-156883090NTRK180.56
View top connections.

Other

CodePlot