SOM cluster: 709

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 601
Promoter: 26%
CpG-Island: 60%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 1.6e-33
Factore-val(match)DB
SP10.00001427JASPAR
PLAG10.003399JASPAR
TFAP2A0.0034586JASPAR
Egr10.038965JASPAR
Zfx0.069779JASPAR
Sites: 40/100 | e-val: 0.046
Factore-val(match)DB
SP10.00034583JASPAR
NFKB10.0067697JASPAR
TFAP2A0.0091814JASPAR
REL0.020296JASPAR
Egr10.048282JASPAR

BED file downloads

Download top of 601 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149684380-149684530RP11-196G18.2123.87
chr7: 107642260-107642410DLD26.96
chr7: 107642260-107642410LAMB126.96
chr10: 13568945-13569095BEND738.37
chr4: 8429460-8429610ACOX344.22
chr4: 8429460-8429610TRMT4444.22
chr3: 32442700-32442850CMTM746.07
chr5: 76114445-76114595F2RL146.58
chr5: 76114445-76114595S100Z46.58
chr12: 38493165-38493315RP11-297L6.147.54
View top connections.

Other

CodePlot