SOM cluster: 717

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 173
Promoter: 14%
CpG-Island: 3%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.00000078
Factore-val(match)DB
EWSR1-FLI10.000000000037733JASPAR
Pax40.000010257JASPAR
SPI10.000028548JASPAR
SP10.000064721JASPAR
SPIB0.00049109JASPAR

BED file downloads

Download top of 173 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 118796860-118797010SUDS355.3
chr12: 118796860-118797010TAOK355.3
chr10: 11220600-11220750CELF257.66
chr17: 73483645-73483795TSEN5459.06
chr17: 73483645-73483795CASKIN259.06
chr17: 73483645-73483795GRB259.06
chr1: 25663485-25663635C1orf6359.83
chrX: 44112680-44112830RRM2P360.72
chr11: 61809600-61809750INCENP61.89
chr22: 50232660-50232810CRELD263.02
View top connections.

Other

CodePlot