SOM cluster: 739

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1514
Promoter: 3%
CpG-Island: 0%
Conserved: 64%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 67/100 | e-val: 2.7e-27
Factore-val(match)DB
FEV0.00000017927JASPAR
SPIB0.000097233JASPAR
Stat30.00014358JASPAR
ELK40.00075872JASPAR
SPI10.00088033JASPAR
Sites: 29/100 | e-val: 0.0015
Factore-val(match)DB
Foxd30.0014522JASPAR
Foxa20.006612JASPAR
Pou5f10.0080147JASPAR
Foxq10.0088454JASPAR
Sox20.010116JASPAR

BED file downloads

Download top of 1514 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr18: 21099800-21099950Y_RNA23.79
chr11: 86170900-86171050ME338.64
chr3: 24630140-24630290THRB38.99
chr1: 220310860-220311010IARS240.89
chr1: 220310860-220311010EPRS40.89
chr1: 220310860-220311010BPNT140.89
chrX: 15316400-15316550PIR43.45
chr3: 128202325-128202475RP11-475N22.444.95
chr3: 128202325-128202475GATA244.95
chr9: 116193580-116193730RGS347.49
View top connections.

Other

CodePlot