SOM cluster: 753

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 309
Promoter: 24%
CpG-Island: 24%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 1.6e-23
Factore-val(match)DB
PLAG10.000014039JASPAR
SP10.000057494JASPAR
TFAP2A0.00019672JASPAR
Zfp4230.0010071JASPAR
ZNF354C0.0011364JASPAR

BED file downloads

Download top of 309 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 204098525-204098675ETNK235.18
chr1: 154540585-154540735RP11-61L14.641.07
chr19: 10628305-10628455AP1M252.32
chr19: 10628305-10628455ATG4D52.32
chr9: 130660985-130661135ST6GALNAC452.95
chr1: 204098865-204099015REN53.9
chr1: 204098865-204099015LINC0030353.9
chr10: 82265160-82265310TSPAN1456.97
chr16: 1420505-1420655CLCN757.43
chr19: 55987385-55987535RPL2857.52
View top connections.

Other

CodePlot