SOM cluster: 76

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 158
Promoter: 12%
CpG-Island: 1%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 69/100 | e-val: 0
Factore-val(match)DB
SPI10.000000016186JASPAR
SPIB0.0000003071JASPAR
FEV0.000054424JASPAR
IRF10.0001587JASPAR
ELF50.00027034JASPAR
Sites: 35/100 | e-val: 2.3e-20
Factore-val(match)DB
Pax40.000000011507JASPAR
SP10.000000021489JASPAR
RREB10.00006642JASPAR
Tal1::Gata10.00011203JASPAR
Klf40.0002435JASPAR

BED file downloads

Download top of 158 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 139555420-139555570TBXAS135.79
chr20: 35899080-35899230MANBAL47.78
chr20: 35899080-35899230GHRH47.78
chr2: 74264800-74264950MGC1095553.76
chr2: 74264800-74264950DGUOK-AS153.76
chr2: 74264800-74264950RP11-711M9.153.76
chr2: 74264800-74264950TET353.76
chr2: 74264800-74264950FNBP1P153.76
chr19: 46018480-46018630FOSB57.52
chrX: 118635040-118635190SLC25A560.52
View top connections.

Other

CodePlot