SOM cluster: 760

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 628
Promoter: 20%
CpG-Island: 57%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
SP10.0000067789JASPAR
TFAP2A0.0039581JASPAR
RREB10.0045611JASPAR
PLAG10.0057478JASPAR
Klf40.0071856JASPAR
Sites: 99/100 | e-val: 1.8e-24
Factore-val(match)DB
SP10.0000041767JASPAR
NHLH10.00026632JASPAR
TFAP2A0.00031638JASPAR
CTCF0.0028006JASPAR
Egr10.0032166JASPAR

BED file downloads

Download top of 628 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 66496505-66496655RP11-658F2.344.24
chr11: 66496505-66496655SPTBN244.24
chr9: 133309325-133309475HMCN246.31
chr9: 133309325-133309475AL354898.146.31
chr7: 100091045-100091195SAP2547.23
chr7: 100091045-100091195AGFG247.23
chr10: 101296565-101296715RP11-129J12.149.12
chr12: 49372520-49372670RP11-386G11.350.4
chr16: 89990665-89990815CENPBD151.44
chr16: 89990665-89990815AFG3L1P51.44
View top connections.

Other

CodePlot