SOM cluster: 762

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 116
Promoter: 26%
CpG-Island: 51%
Conserved: 64%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 2.4e-36
Factore-val(match)DB
SP10.0000000030749JASPAR
Pax40.000031117JASPAR
EWSR1-FLI10.00098324JASPAR
RXR::RAR_DR50.0014389JASPAR
MZF1_1-40.002118JASPAR
Sites: 7/100 | e-val: 2.2
Factore-val(match)DB
IRF10.000016525JASPAR
EWSR1-FLI10.0011461JASPAR
Foxd30.0038077JASPAR
IRF20.008649JASPAR
Foxq10.038113JASPAR

BED file downloads

Download top of 116 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 162666085-162666235HSD17B757.22
chr1: 162666085-162666235DDR257.22
chr2: 161264600-161264750RBMS168.96
chr3: 64671380-64671530ADAMTS969.83
chr2: 66802280-66802430MEIS170.83
chr1: 157963000-157963150KIRREL70.95
chr1: 157963000-157963150KIRREL-IT170.95
chr18: 6729085-6729235ARHGAP2873.61
chr8: 97506160-97506310SDC273.71
chr5: 92023900-92024050CTC-529L17.273.76
View top connections.

Other

CodePlot