SOM cluster: 77

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 373
Promoter: 15%
CpG-Island: 2%
Conserved: 69%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 0
Factore-val(match)DB
SPI10.0000000091604JASPAR
FEV0.000000013074JASPAR
ELK40.0000006276JASPAR
SPIB0.00000083417JASPAR
ELF50.0000047308JASPAR
Sites: 50/100 | e-val: 0.0000000000000017
Factore-val(match)DB
EWSR1-FLI10.0000012328JASPAR
SPI10.0000048823JASPAR
FEV0.000034425JASPAR
SPIB0.000055631JASPAR
Stat30.00011584JASPAR
Sites: 20/100 | e-val: 0.03
Factore-val(match)DB
SP10.0000014983JASPAR
RREB10.000019125JASPAR
Pax40.00039089JASPAR
Klf40.0008284JASPAR
Egr10.001875JASPAR

BED file downloads

Download top of 373 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 6193220-6193370RP11-414H17.527.02
chr9: 134531960-134532110RAPGEF137.34
chr9: 134531960-134532110RN7SL328P37.34
chr17: 73567360-73567510CASKIN240.7
chr17: 38252400-38252550THRA45.44
chrX: 129226220-129226370AIFM147.07
chrX: 129226220-129226370ELF447.07
chr17: 66255340-66255490SLC16A651.71
chr17: 66255340-66255490ARSG51.71
chr20: 50158000-50158150NFATC257.48
View top connections.

Other

CodePlot