SOM cluster: 773

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2004
Promoter: 13%
CpG-Island: 0%
Conserved: 22%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.0000000027
Factore-val(match)DB
Foxd30.000054841JASPAR
Foxq10.0012401JASPAR
Pax40.0018293JASPAR
Lhx30.002JASPAR
HNF1A0.0020328JASPAR

BED file downloads

Download top of 2004 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 130698405-130698695FAM102A37.25
chr9: 130698405-130698695RP11-203J24.837.25
chr11: 11999225-11999375RP13-631K18.240.35
chr7: 130557660-130557810MIR29A46.38
chr3: 182972705-182972855B3GNT547.4
chr11: 65661260-65661410DRAP147.91
chr11: 65661260-65661410FIBP47.91
chr5: 72837220-72837370ARHGEF2848.12
chr4: 174113640-174113790GALNT748.47
chr15: 96818000-96818150RP11-522B15.349.39
View top connections.

Other

CodePlot